Tool Maximum Entropy Presence Prediction

Maximum Entropy Presence Prediction

References

Author: O.Conrad (c) 2015
Menu: Grid|Analysis|Macroecology

Parameters

	Name	Type	Identifier	Description	Constraints
Input	Presence Data	shapes, input	`PRESENCE`	-	-
	Numerical Features (*)	grid list, input, optional	`FEATURES_NUM`	-	-
	Categorical Features (*)	grid list, input, optional	`FEATURES_CAT`	-	-
Output	Presence Prediction	grid, output	`PREDICTION`	-	-
Output	Presence Probability	grid, output	`PROBABILITY`	-	-
Options	Grid System	grid system	`PARAMETERS_GRID_SYSTEM`	-	-
	Background Sample Density [Percent]	floating point number	`BACKGROUND`	-	Minimum: 0.000000 Maximum: 100.000000 Default: 1.000000
	Method	choice	`METHOD`	-	Available Choices: [0] Yoshimasa Tsuruoka [1] Dekang Lin Default: 0
	Load from File...	file path	`YT_FILE_LOAD`	-	-
	Save to File...	file path	`YT_FILE_SAVE`	-	-
	Regularization	choice	`YT_REGUL`	-	Available Choices: [0] none [1] L1 [2] L2 Default: 1
	Regularization Factor	floating point number	`YT_REGUL_VAL`	-	Minimum: 0.000000 Default: 1.000000
	Real-valued Numerical Features	boolean	`YT_NUMASREAL`	-	Default: 1
	Alpha	floating point number	`DL_ALPHA`	-	Default: 0.100000
	Threshold	floating point number	`DL_THRESHOLD`	-	Minimum: 0.000000 Default: 0.000000
	Maximum Iterations	integer number	`DL_ITERATIONS`	-	Minimum: 1 Default: 100
	Number of Numeric Value Classes	integer number	`NUM_CLASSES`	-	Minimum: 1 Default: 32
(*) optional

Command-line

Usage: saga_cmd imagery_maxent 1 [-PRESENCE <str>] [-FEATURES_NUM <str>] [-FEATURES_CAT <str>] [-PREDICTION <str>] [-PROBABILITY <str>] [-BACKGROUND <double>] [-METHOD <str>] [-YT_FILE_LOAD <str>] [-YT_FILE_SAVE <str>] [-YT_REGUL <str>] [-YT_REGUL_VAL <double>] [-YT_NUMASREAL <str>] [-DL_ALPHA <double>] [-DL_THRESHOLD <double>] [-DL_ITERATIONS <num>] [-NUM_CLASSES <num>]
  -PRESENCE:<str>       	Presence Data
	shapes, input
  -FEATURES_NUM:<str>   	Numerical Features
	grid list, input, optional
  -FEATURES_CAT:<str>   	Categorical Features
	grid list, input, optional
  -PREDICTION:<str>     	Presence Prediction
	grid, output
  -PROBABILITY:<str>    	Presence Probability
	grid, output
  -BACKGROUND:<double>  	Background Sample Density [Percent]
	floating point number
	Minimum: 0.000000
	Maximum: 100.000000
	Default: 1.000000
  -METHOD:<str>         	Method
	choice
	Available Choices:
	[0] Yoshimasa Tsuruoka
	[1] Dekang Lin
	Default: 0
  -YT_FILE_LOAD:<str>   	Load from File...
	file path
  -YT_FILE_SAVE:<str>   	Save to File...
	file path
  -YT_REGUL:<str>       	Regularization
	choice
	Available Choices:
	[0] none
	[1] L1
	[2] L2
	Default: 1
  -YT_REGUL_VAL:<double>	Regularization Factor
	floating point number
	Minimum: 0.000000
	Default: 1.000000
  -YT_NUMASREAL:<str>   	Real-valued Numerical Features
	boolean
	Default: 1
  -DL_ALPHA:<double>    	Alpha
	floating point number
	Default: 0.100000
  -DL_THRESHOLD:<double>	Threshold
	floating point number
	Minimum: 0.000000
	Default: 0.000000
  -DL_ITERATIONS:<num>  	Maximum Iterations
	integer number
	Minimum: 1
	Default: 100
  -NUM_CLASSES:<num>    	Number of Numeric Value Classes
	integer number
	Minimum: 1
	Default: 32